MLOC_64142 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.184447.842887.222795.91586
LEAShoots from the seedlings (10 cm shoot stage)6.344595.280855.068584.58157
INF1Young developing inflorescences (5mm)5.757856.42145.916894.91918
INF2Developing inflorescences (1-1.5 cm)6.620687.130056.275847.20212
ROORoots from the seedlings (10 cm shoot stage)2.51265.56582.745095.56194
NODDeveloping tillers at six leaf stage, 3rd internode12.189910.875510.127935.0288
CAR5Developing grain, bracts removed (5 DPA)6.485545.275076.112775.56368
CAR15Developing grain, bracts removed (15 DPA)5.309214.608046.2546711.6992



CDS Structure of MLOC_64142






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64142.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64142.1CUST_14640_PI427708080AvailableAvailablecontig_48414 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g31056.1 +3 1e-43 170 104/235 (44%) 13105.m03187 protein tetratricopeptide repeat containing protein, putative, expressed
TAIR PP10 AT5G12430.1 +3 4e-40 160 79/133 (59%) | Symbols: TPR16 | Heat shock protein DnaJ with tetratricopeptide repeat | chr5:4028475-4034086 REVERSE LENGTH=1165