MLOC_64141 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains20.126715.96214.602816.0836
LEAShoots from the seedlings (10 cm shoot stage)26.065717.586723.175617.7328
INF1Young developing inflorescences (5mm)16.807817.453316.480714.3074
INF2Developing inflorescences (1-1.5 cm)11.181212.436510.035612.4206
ROORoots from the seedlings (10 cm shoot stage)10.79099.642267.3670910.7199
NODDeveloping tillers at six leaf stage, 3rd internode7.0796310.980918.196536.89
CAR5Developing grain, bracts removed (5 DPA)10.841111.258810.965110.7428
CAR15Developing grain, bracts removed (15 DPA)2.139042.58451.882685.23636



CDS Structure of MLOC_64141






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64141.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354525NoneNoneNoneNone
MLOC_64141.1CUST_4920_PI427708080AvailableAvailablecontig_48414 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g16530.1 +2 8e-127 372 211/241 (88%) 13101.m01848 protein OsClp1 - Putative Clp protease homologue, expressed
TAIR PP10 AT4G17040.1 +2 2e-99 301 169/218 (78%) | Symbols: CLPR4 | CLP protease R subunit 4 | chr4:9586740-9589297 REVERSE LENGTH=305