MLOC_64122 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.577342.496561.517532.17576
LEAShoots from the seedlings (10 cm shoot stage)8.9522717.199523.812415.0869
INF1Young developing inflorescences (5mm)0.1201830.02538520.09039390.0736024
INF2Developing inflorescences (1-1.5 cm)0.1262280.2483410.2953550.23978
ROORoots from the seedlings (10 cm shoot stage)6.242147.289154.966318.94397
NODDeveloping tillers at six leaf stage, 3rd internode0.5466680.57851.626942.61171
CAR5Developing grain, bracts removed (5 DPA)6.881316.983456.827557.08883
CAR15Developing grain, bracts removed (15 DPA)1.794462.796681.870985.15257



CDS Structure of MLOC_64122






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64122.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252894.1NoneNoneNoneNone
MLOC_64122.1CUST_4916_PI427708080AvailableAvailablecontig_48389 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g51430.2 +2 2e-162 470 227/296 (77%) 13103.m05591 protein SEC14 cytosolic factor family protein, putative, expressed
TAIR PP10 AT1G75170.2 +2 5e-107 327 154/290 (53%) Sec14p-like phosphatidylinositol transfer family protein | chr1:28214405-28215686 FORWARD LENGTH=296