MLOC_64106 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains38.203552.090543.743641.4205
LEAShoots from the seedlings (10 cm shoot stage)23.5214.913893.437459.27453
INF1Young developing inflorescences (5mm)153.874162.297153.623118.499
INF2Developing inflorescences (1-1.5 cm)158.836187.505156.28164.842
ROORoots from the seedlings (10 cm shoot stage)21.482638.329331.941936.5622
NODDeveloping tillers at six leaf stage, 3rd internode16.579660.765823.0067157.106
CAR5Developing grain, bracts removed (5 DPA)139.575120.493131.011109.161
CAR15Developing grain, bracts removed (15 DPA)23.117717.220723.330542.3799



CDS Structure of MLOC_64106






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64106.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64106.1CUST_14634_PI427708080AvailableAvailablecontig_48373 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g51270.1 -2 0.0 1232 617/650 (95%) 13106.m05531 protein 1,3-beta-glucan synthase component domain containing protein, expressed
TAIR PP10 AT5G13000.1 -2 0.0 1117 546/650 (84%) | Symbols: ATGSL12, gsl12 | glucan synthase-like 12 | chr5:4110445-4121202 REVERSE LENGTH=1955