- Predicted Gene MLOC_64088
MLOC_64088 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 31.4702 | 22.3964 | 25.8139 | 24.3805 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 117.852 | 149.711 | 102.618 | 91.307 |
| INF1 | Young developing inflorescences (5mm) | 2.23421 | 2.09218 | 3.20321 | 1.96342 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.29703 | 1.43223 | 2.45423 | 2.06099 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 6.61804 | 13.4118 | 11.3369 | 12.5304 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 51.551 | 23.0336 | 23.179 | 59.0084 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 26.0744 | 29.8361 | 28.7606 | 25.8927 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.27275 | 2.76007 | 8.14467 | 10.0088 |
CDS Structure of MLOC_64088
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_64088.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g11240.1 |
-2 |
9e-79 |
250 |
121/147 (82%) |
13101.m01212 protein DUF538 domain containing protein, putative, expressed |
| TAIR PP10 |
AT5G46230.1 |
-2 |
6e-46 |
160 |
70/130 (54%) |
Protein of unknown function, DUF538 | chr5:18742593-18743024 REVERSE LENGTH=143 |
