MLOC_64085 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.862658.055177.151727.20968
LEAShoots from the seedlings (10 cm shoot stage)8.698319.624788.85357.22822
INF1Young developing inflorescences (5mm)16.585717.029519.476213.5825
INF2Developing inflorescences (1-1.5 cm)14.703712.405213.994213.7562
ROORoots from the seedlings (10 cm shoot stage)4.461387.593667.068787.85515
NODDeveloping tillers at six leaf stage, 3rd internode5.841985.376829.7826219.9504
CAR5Developing grain, bracts removed (5 DPA)7.661277.754077.703116.84928
CAR15Developing grain, bracts removed (15 DPA)2.751752.645022.734485.76866



CDS Structure of MLOC_64085






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64085.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64085.2CUST_14632_PI427708080AvailableAvailablecontig_48346 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g52470.2 -3 0.0 668 329/353 (93%) 13102.m12456 protein ATP-binding domain-containing protein, putative, expressed
TAIR PP10 AT2G44270.1 -3 0.0 585 291/349 (83%) | Symbols: ROL5 | repressor of lrx1 | chr2:18298078-18300153 REVERSE LENGTH=355