MLOC_64084 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains32.874633.694830.173938.0449
LEAShoots from the seedlings (10 cm shoot stage)20.825215.953719.159118.1771
INF1Young developing inflorescences (5mm)41.085642.185540.303138.118
INF2Developing inflorescences (1-1.5 cm)35.471643.209836.280347.6869
ROORoots from the seedlings (10 cm shoot stage)19.770830.377624.398740.3425
NODDeveloping tillers at six leaf stage, 3rd internode11.940114.190820.001555.9898
CAR5Developing grain, bracts removed (5 DPA)47.821951.421445.878153.9436
CAR15Developing grain, bracts removed (15 DPA)21.838419.367618.362850.7314



CDS Structure of MLOC_64084






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64084.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249596.1NoneNoneNoneNone
MLOC_64084.2CUST_4911_PI427708080AvailableAvailablecontig_48346 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g26130.1 +1 0.0 853 426/493 (86%) 13110.m02218 protein phenylalanyl-tRNA synthetase, putative, expressed
TAIR PP10 AT4G39280.1 +1 0.0 625 324/490 (66%) phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative | chr4:18281641-18284831 REVERSE LENGTH=485