MLOC_64063 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains99.578177.659972.986487.4371
LEAShoots from the seedlings (10 cm shoot stage)64.194322.334834.314635.7809
INF1Young developing inflorescences (5mm)144.086146.91159.538137.211
INF2Developing inflorescences (1-1.5 cm)113.617133.689137.495148.223
ROORoots from the seedlings (10 cm shoot stage)84.08885.018282.2523109.124
NODDeveloping tillers at six leaf stage, 3rd internode25.590345.243756.1581164.256
CAR5Developing grain, bracts removed (5 DPA)104.527104.511104.705109.237
CAR15Developing grain, bracts removed (15 DPA)63.111653.472263.4605148.122



CDS Structure of MLOC_64063






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64063.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358878NoneNoneNoneNone
MLOC_64063.2CUST_4909_PI427708080AvailableAvailablecontig_48324 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g30430.1 -2 3e-134 404 268/393 (68%) 13104.m02888 protein nuclear transport factor 2, putative, expressed
TAIR PP10 AT5G60980.2 -2 2e-76 252 174/402 (43%) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | chr5:24543988-24546027 FORWARD LENGTH=460