- Predicted Gene MLOC_64063
MLOC_64063 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 99.5781 | 77.6599 | 72.9864 | 87.4371 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 64.1943 | 22.3348 | 34.3146 | 35.7809 |
INF1 | Young developing inflorescences (5mm) | 144.086 | 146.91 | 159.538 | 137.211 |
INF2 | Developing inflorescences (1-1.5 cm) | 113.617 | 133.689 | 137.495 | 148.223 |
ROO | Roots from the seedlings (10 cm shoot stage) | 84.088 | 85.0182 | 82.2523 | 109.124 |
NOD | Developing tillers at six leaf stage, 3rd internode | 25.5903 | 45.2437 | 56.1581 | 164.256 |
CAR5 | Developing grain, bracts removed (5 DPA) | 104.527 | 104.511 | 104.705 | 109.237 |
CAR15 | Developing grain, bracts removed (15 DPA) | 63.1116 | 53.4722 | 63.4605 | 148.122 |
CDS Structure of MLOC_64063
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_64063.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g30430.1 |
-2 |
3e-134 |
404 |
268/393 (68%) |
13104.m02888 protein nuclear transport factor 2, putative, expressed |
TAIR PP10 |
AT5G60980.2 |
-2 |
2e-76 |
252 |
174/402 (43%) |
Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | chr5:24543988-24546027 FORWARD LENGTH=460 |