MLOC_64057 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.756737.019416.976837.93163
LEAShoots from the seedlings (10 cm shoot stage)11.631615.256617.140811.8708
INF1Young developing inflorescences (5mm)2.4413.321427.754934.18451
INF2Developing inflorescences (1-1.5 cm)4.727033.413097.090495.71102
ROORoots from the seedlings (10 cm shoot stage)16.332411.22313.172413.8237
NODDeveloping tillers at six leaf stage, 3rd internode21.109410.779928.746236.9453
CAR5Developing grain, bracts removed (5 DPA)13.304911.467111.810813.1474
CAR15Developing grain, bracts removed (15 DPA)1.681821.613711.827264.50399



CDS Structure of MLOC_64057






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64057.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376297NoneNoneNoneNone
MLOC_64057.2CUST_4907_PI427708080AvailableAvailablecontig_48317 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g21030.1 +2 3e-148 435 257/365 (70%) 13103.m02520 protein no apical meristem protein, putative, expressed
TAIR PP10 AT3G04060.1 +2 6e-77 249 153/329 (47%) | Symbols: anac046, NAC046 | NAC domain containing protein 46 | chr3:1053625-1054952 REVERSE LENGTH=338