MLOC_64053 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4640340.3464170.4469880.397689
LEAShoots from the seedlings (10 cm shoot stage)0.31617700.4933440.337027
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.6640152.060491.152271.91526
NODDeveloping tillers at six leaf stage, 3rd internode00.0174560.008908150.0657229
CAR5Developing grain, bracts removed (5 DPA)4.693996.926344.368565.49691
CAR15Developing grain, bracts removed (15 DPA)0.04617010.02754600.12171



CDS Structure of MLOC_64053






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64053.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376120NoneNoneNoneNone
MLOC_64053.1CUST_4906_PI427708080AvailableAvailablecontig_48312 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g12890.2 +3 8e-153 444 258/355 (73%) 13107.m01340 protein metal cation transporter, putative, expressed
TAIR PP10 AT1G05300.1 +3 5e-82 262 163/347 (47%) | Symbols: ZIP5 | zinc transporter 5 precursor | chr1:1545258-1547709 REVERSE LENGTH=360