MLOC_64048 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2479020.4334641.408940.914756
LEAShoots from the seedlings (10 cm shoot stage)0.6380320.3869070.8155220.567955
INF1Young developing inflorescences (5mm)1.377090.3531340.3956510.68514
INF2Developing inflorescences (1-1.5 cm)0.9734360.4593950.3704020.842902
ROORoots from the seedlings (10 cm shoot stage)3.332421.244471.618132.14295
NODDeveloping tillers at six leaf stage, 3rd internode0.9378561.329293.592196.06717
CAR5Developing grain, bracts removed (5 DPA)0.1896850.5406110.5411770.631755
CAR15Developing grain, bracts removed (15 DPA)0.2633880.1526390.3854120.753834



CDS Structure of MLOC_64048






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64048.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64048.1CUST_8668_PI427708083AvailableAvailablecontig_48305 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g40360.1 +3 2e-18 81 35/50 (70%) 13106.m04195 protein OsFBL30 - F-box domain and LRR containing protein, expressed
TAIR PP10 AT2G25490.1 +3 4e-12 62 28/49 (57%) | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1 | chr2:10848018-10850275 REVERSE LENGTH=628