- Predicted Gene MLOC_64045
MLOC_64045 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.12436 | 2.0407 | 2.51157 | 2.27284 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.78031 | 1.85184 | 1.45059 | 1.31682 |
INF1 | Young developing inflorescences (5mm) | 2.26685 | 2.08082 | 1.80218 | 1.63811 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.012 | 2.12976 | 2.77804 | 2.75418 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.7983 | 2.25952 | 3.42822 | 2.78211 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.08384 | 1.59038 | 1.42058 | 5.03286 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.06155 | 6.0182 | 5.42645 | 5.38131 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.31827 | 2.9223 | 2.44585 | 5.80386 |
CDS Structure of MLOC_64045
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_64045.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g20720.1 |
-1 |
4e-122 |
370 |
196/376 (52%) |
13102.m02319 protein MBTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain |
TAIR PP10 |
AT3G06190.1 |
-1 |
8e-73 |
241 |
141/357 (39%) |
| Symbols: ATBPM2, BPM2 | BTB-POZ and MATH domain 2 | chr3:1874577-1876575 REVERSE LENGTH=406 |