MLOC_64043 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0.06394890.03775660.225970.0955929
INF1Young developing inflorescences (5mm)0.03173250.018563200.0243841
INF2Developing inflorescences (1-1.5 cm)0.01674770.0321820.02036630.030844
ROORoots from the seedlings (10 cm shoot stage)00.024937400.119761
NODDeveloping tillers at six leaf stage, 3rd internode0.01405090.007290350.06004010.0542541
CAR5Developing grain, bracts removed (5 DPA)0.06074320.03859180.01984910.0425369
CAR15Developing grain, bracts removed (15 DPA)0.0156581000.0544034



CDS Structure of MLOC_64043






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64043.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357266NoneNoneNoneNone
MLOC_64043.1CUST_7000_PI427708080AvailableAvailablecontig_48302 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g32640.1 +1 3e-17 87 66/270 (24%) 13110.m02851 protein retrotransposon protein, putative, Ty3-gypsy subclass
TAIR PP10None-----