MLOC_64029 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2982150.3138070.1677910.283265
LEAShoots from the seedlings (10 cm shoot stage)0.257930.1505580.09671580.148436
INF1Young developing inflorescences (5mm)0.7149790.6365540.7040630.584149
INF2Developing inflorescences (1-1.5 cm)0.7795880.7125310.6858430.784847
ROORoots from the seedlings (10 cm shoot stage)0.253850.3571720.2904490.396915
NODDeveloping tillers at six leaf stage, 3rd internode0.0473720.06594380.08528890.215298
CAR5Developing grain, bracts removed (5 DPA)0.546930.5178680.5481030.510657
CAR15Developing grain, bracts removed (15 DPA)1.082070.3908851.118691.90641



CDS Structure of MLOC_64029






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64029.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_64029.1CUST_14628_PI427708080AvailableAvailablecontig_48289 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g01836.1 -2 0.0 900 474/644 (74%) 13111.m00099 protein pentatricopeptide, putative, expressed
TAIR PP10 AT3G08820.1 -2 3e-168 523 259/572 (45%) Pentatricopeptide repeat (PPR) superfamily protein | chr3:2677122-2679179 REVERSE LENGTH=685