MLOC_64016 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.485625.129388.221426.45575
LEAShoots from the seedlings (10 cm shoot stage)0.2511410.971990.121370.349535
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)7.948534.980932.558185.17876
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.1612620.06163580.06229130.093225
CAR15Developing grain, bracts removed (15 DPA)0.5447990.3588720.7890161.33472



CDS Structure of MLOC_64016






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_64016.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251657.1NoneNoneNoneNone
MLOC_64016.1CUST_4902_PI427708080AvailableAvailablecontig_48276 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g44780.1 -2 1e-135 402 224/364 (62%) 13107.m04714 protein GDSL-like lipase/acylhydrolase, putative, expressed
TAIR PP10 AT1G28650.1 -2 5e-75 245 151/359 (42%) GDSL-like Lipase/Acylhydrolase superfamily protein | chr1:10069547-10071082 REVERSE LENGTH=385