MLOC_63996 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.526250.9871791.007261.05932
LEAShoots from the seedlings (10 cm shoot stage)64.6176145.789154.09687.8128
INF1Young developing inflorescences (5mm)1.393180.6959280.856640.809124
INF2Developing inflorescences (1-1.5 cm)0.2056030.1697480.2573950.2118
ROORoots from the seedlings (10 cm shoot stage)0.1837661.058460.613280.877777
NODDeveloping tillers at six leaf stage, 3rd internode17.567516.014450.171557.3265
CAR5Developing grain, bracts removed (5 DPA)4.403753.114993.537133.36633
CAR15Developing grain, bracts removed (15 DPA)0.5902160.9199020.551911.62234



CDS Structure of MLOC_63996






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63996.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251153.1NoneNoneNoneNone
MLOC_63996.1CUST_4899_PI427708080AvailableAvailablecontig_48254 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g50460.1 +2 3e-108 324 191/226 (85%) 13101.m05249 protein nodulin MtN3 family protein, putative, expressed
TAIR PP10 AT3G14770.1 +2 9e-66 214 110/203 (54%) | Symbols: SWEET2, AtSWEET2 | Nodulin MtN3 family protein | chr3:4957787-4959202 REVERSE LENGTH=236