- Predicted Gene MLOC_63940
MLOC_63940 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.21607 | 2.36874 | 2.44505 | 2.28962 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.1612 | 0.766453 | 1.69459 | 1.54422 |
| INF1 | Young developing inflorescences (5mm) | 1.01946 | 1.10427 | 1.30695 | 1.01481 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.12807 | 1.33628 | 1.47742 | 1.45377 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.22701 | 2.4568 | 3.64251 | 3.00736 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.45456 | 6.37431 | 7.63664 | 18.5831 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.19151 | 2.96376 | 2.46683 | 2.85744 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.511528 | 0.459229 | 0.398888 | 1.16143 |
CDS Structure of MLOC_63940
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_63940.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g16950.1 |
-3 |
4e-69 |
233 |
155/276 (56%) |
13101.m01899 protein zinc finger, C3HC4 type domain containing protein, expressed |
| TAIR PP10 |
AT5G56340.1 |
-3 |
3e-39 |
150 |
66/107 (62%) |
| Symbols: ATCRT1 | RING/U-box superfamily protein | chr5:22818254-22819444 FORWARD LENGTH=396 |