MLOC_63939 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains92.10991.394495.095996.2597
LEAShoots from the seedlings (10 cm shoot stage)51.316841.321937.981238.0894
INF1Young developing inflorescences (5mm)46.591941.947339.867737.5516
INF2Developing inflorescences (1-1.5 cm)34.315646.6639.413146.7287
ROORoots from the seedlings (10 cm shoot stage)75.471898.765183.136118.266
NODDeveloping tillers at six leaf stage, 3rd internode42.464230.118529.4377104.158
CAR5Developing grain, bracts removed (5 DPA)40.837637.699242.273940.9072
CAR15Developing grain, bracts removed (15 DPA)10.227810.4678.2846923.6312



CDS Structure of MLOC_63939






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63939.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248615.1NoneNoneNoneNone
MLOC_63939.1CUST_4887_PI427708080AvailableAvailablecontig_48168 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g16960.1 +2 0.0 872 459/507 (91%) 13101.m01900 protein pyruvate kinase, putative, expressed
TAIR PP10 AT5G56350.1 +2 0.0 791 407/496 (82%) Pyruvate kinase family protein | chr5:22820254-22822529 REVERSE LENGTH=498