MLOC_63920 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.684533.435152.162443.00856
LEAShoots from the seedlings (10 cm shoot stage)30.442258.426662.181844.6259
INF1Young developing inflorescences (5mm)7.531856.639984.876335.79927
INF2Developing inflorescences (1-1.5 cm)8.719645.793446.203468.03624
ROORoots from the seedlings (10 cm shoot stage)1.583043.278923.376493.92279
NODDeveloping tillers at six leaf stage, 3rd internode31.938943.681248.5961143.473
CAR5Developing grain, bracts removed (5 DPA)5.159374.942224.443795.16673
CAR15Developing grain, bracts removed (15 DPA)1.203771.409220.9427273.1689



CDS Structure of MLOC_63920






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63920.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358104NoneNoneNoneNone
MLOC_63920.1CUST_4883_PI427708080AvailableAvailablecontig_48126 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g52640.3 -1 0.0 875 490/565 (87%) 13101.m05510 protein suppressor of phythchrome A, putative, expressed
TAIR PP10 AT1G53090.2 -1 0.0 775 427/754 (57%) | Symbols: SPA4 | SPA1-related 4 | chr1:19783748-19786690 FORWARD LENGTH=794