MLOC_63917 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.55617.592418.634217.2603
LEAShoots from the seedlings (10 cm shoot stage)19.000919.887620.462317.9443
INF1Young developing inflorescences (5mm)30.214831.353830.542625.7991
INF2Developing inflorescences (1-1.5 cm)34.037338.014738.849338.8043
ROORoots from the seedlings (10 cm shoot stage)18.99221.128120.496926.4313
NODDeveloping tillers at six leaf stage, 3rd internode25.12828.201322.847186.7105
CAR5Developing grain, bracts removed (5 DPA)25.480724.914726.852424.2622
CAR15Developing grain, bracts removed (15 DPA)11.053511.013111.582824.9264



CDS Structure of MLOC_63917






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63917.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_63917.1CUST_14615_PI427708080AvailableAvailablecontig_48121 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g52150.1 -2 0.0 1578 750/799 (94%) 13103.m05679 protein metalloendopeptidase/ metallopeptidase/ zinc ion binding protein, putative, expressed
TAIR PP10 AT5G42620.2 -2 0.0 1273 603/791 (76%) metalloendopeptidases;zinc ion binding | chr5:17066630-17071766 FORWARD LENGTH=889