- Predicted Gene MLOC_63917
MLOC_63917 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 12.556 | 17.5924 | 18.6342 | 17.2603 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 19.0009 | 19.8876 | 20.4623 | 17.9443 |
INF1 | Young developing inflorescences (5mm) | 30.2148 | 31.3538 | 30.5426 | 25.7991 |
INF2 | Developing inflorescences (1-1.5 cm) | 34.0373 | 38.0147 | 38.8493 | 38.8043 |
ROO | Roots from the seedlings (10 cm shoot stage) | 18.992 | 21.1281 | 20.4969 | 26.4313 |
NOD | Developing tillers at six leaf stage, 3rd internode | 25.128 | 28.2013 | 22.8471 | 86.7105 |
CAR5 | Developing grain, bracts removed (5 DPA) | 25.4807 | 24.9147 | 26.8524 | 24.2622 |
CAR15 | Developing grain, bracts removed (15 DPA) | 11.0535 | 11.0131 | 11.5828 | 24.9264 |
CDS Structure of MLOC_63917
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_63917.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g52150.1 |
-2 |
0.0 |
1578 |
750/799 (94%) |
13103.m05679 protein metalloendopeptidase/ metallopeptidase/ zinc ion binding protein, putative, expressed |
TAIR PP10 |
AT5G42620.2 |
-2 |
0.0 |
1273 |
603/791 (76%) |
metalloendopeptidases;zinc ion binding | chr5:17066630-17071766 FORWARD LENGTH=889 |