MLOC_6391 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.324552.739333.131272.87482
LEAShoots from the seedlings (10 cm shoot stage)1.220390.1472240.1918790.464266
INF1Young developing inflorescences (5mm)8.954288.910497.799467.45036
INF2Developing inflorescences (1-1.5 cm)1.742651.967632.011992.17398
ROORoots from the seedlings (10 cm shoot stage)0.9985831.65741.618541.97583
NODDeveloping tillers at six leaf stage, 3rd internode6.857394.119341.2571712.665
CAR5Developing grain, bracts removed (5 DPA)0.3045590.1929130.287950.25986
CAR15Developing grain, bracts removed (15 DPA)0.03702060.08086670.1351870.186072



CDS Structure of MLOC_6391






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_6391.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_6391.1CUST_14612_PI427708080AvailableAvailablecontig_137484 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g57510.1 -3 0.0 928 472/541 (87%) 13103.m06307 protein CAMK_CAMK_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
TAIR PP10 AT5G04870.1 -3 0.0 755 368/466 (79%) | Symbols: CPK1, ATCPK1 | calcium dependent protein kinase 1 | chr5:1417015-1419877 REVERSE LENGTH=610