MLOC_63900 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.521122.755422.444320.5995
LEAShoots from the seedlings (10 cm shoot stage)24.514820.008222.466218.8053
INF1Young developing inflorescences (5mm)24.798126.144925.62421.4156
INF2Developing inflorescences (1-1.5 cm)21.206623.12621.622823.5058
ROORoots from the seedlings (10 cm shoot stage)17.989324.207118.674526.5599
NODDeveloping tillers at six leaf stage, 3rd internode12.362415.380815.634446.7867
CAR5Developing grain, bracts removed (5 DPA)31.062830.253529.627628.3077
CAR15Developing grain, bracts removed (15 DPA)9.9511510.18469.8079623.3875



CDS Structure of MLOC_63900






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63900.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372953NoneNoneNoneNone
MLOC_63900.2CUST_4881_PI427708080AvailableAvailablecontig_48098 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g05240.1 -1 0.0 1541 821/887 (93%) 13105.m00542 protein serine/threonine protein phosphatase, putative, expressed
TAIR PP10 AT4G03080.1 -1 0.0 1251 672/895 (75%) | Symbols: BSL1 | BRI1 suppressor 1 (BSU1)-like 1 | chr4:1359935-1365166 REVERSE LENGTH=881