MLOC_639 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.328233.273623.649122.5534
LEAShoots from the seedlings (10 cm shoot stage)24.963412.076511.414212.9527
INF1Young developing inflorescences (5mm)57.23352.703147.249339.7029
INF2Developing inflorescences (1-1.5 cm)52.403746.931743.844347.7259
ROORoots from the seedlings (10 cm shoot stage)11.112623.089419.536721.589
NODDeveloping tillers at six leaf stage, 3rd internode6.519038.3442413.450227.6197
CAR5Developing grain, bracts removed (5 DPA)36.563634.817634.70530.5785
CAR15Developing grain, bracts removed (15 DPA)12.257111.586610.257424.2021



CDS Structure of MLOC_639






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_639.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_639.2CUST_14608_PI427708080AvailableAvailablecontig_104727 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g38760.1 -3 2e-63 234 192/784 (24%) 13107.m04011 protein HEAT repeat family protein, putative, expressed
TAIR PP10 AT4G27640.1 -3 0.0 1126 594/833 (71%) ARM repeat superfamily protein | chr4:13798013-13802976 REVERSE LENGTH=1048