- Predicted Gene MLOC_63880
MLOC_63880 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_63880_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_63880_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 8.49691 | 7.84372 | 8.40057 | 8.08634 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 13.0091 | 10.3226 | 11.128 | 9.90993 |
INF1 | Young developing inflorescences (5mm) | 4.48781 | 5.48726 | 5.9319 | 4.38261 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.31185 | 5.4807 | 5.91253 | 6.07817 |
ROO | Roots from the seedlings (10 cm shoot stage) | 19.4119 | 12.9909 | 13.0884 | 16.8156 |
NOD | Developing tillers at six leaf stage, 3rd internode | 21.9077 | 25.3594 | 16.8929 | 73.0375 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.9731 | 8.14459 | 8.57722 | 8.30802 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.01688 | 4.17164 | 3.90903 | 9.25862 |
CDS Structure of MLOC_63880
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_63880.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g55640.2 |
+3 |
1e-72 |
199 |
179/326 (55%) |
13103.m06056 protein OsSigP2 - Putative Type I Signal Peptidase homologue; employs a putative Ser/Lys catalytic dyad, expressed |
TAIR PP10 |
AT2G30440.1 |
+3 |
3e-30 |
73 |
32/58 (55%) |
| Symbols: TPP | thylakoid processing peptide | chr2:12973244-12975027 FORWARD LENGTH=340 |