MLOC_63875 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.187359.896867.760028.0386
LEAShoots from the seedlings (10 cm shoot stage)2.699582.43683.823792.2683
INF1Young developing inflorescences (5mm)7.026917.13057.537985.31426
INF2Developing inflorescences (1-1.5 cm)1.023851.487682.628091.48545
ROORoots from the seedlings (10 cm shoot stage)13.47718.96616.560269.79896
NODDeveloping tillers at six leaf stage, 3rd internode0.973552.348380.2476645.84728
CAR5Developing grain, bracts removed (5 DPA)18.830515.48911.118112.942
CAR15Developing grain, bracts removed (15 DPA)241.242260.343231.963492



CDS Structure of MLOC_63875






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63875.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249110.1NoneNoneNoneNone
MLOC_63875.1CUST_18285_PI427708080AvailableAvailablecontig_48063 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g11440.1 -1 0.0 905 457/475 (96%) 13103.m01291 protein protein transport protein Sec61 subunit alpha, putative, expressed
TAIR PP10 AT2G34250.2 -1 0.0 860 428/475 (90%) SecY protein transport family protein | chr2:14462635-14464572 FORWARD LENGTH=475