MLOC_63864 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.906045.906944.91127.2281
LEAShoots from the seedlings (10 cm shoot stage)6.7991615.534515.006712.4086
INF1Young developing inflorescences (5mm)0.7417221.204571.446191.25691
INF2Developing inflorescences (1-1.5 cm)1.940631.117051.793972.0531
ROORoots from the seedlings (10 cm shoot stage)12.623810.654811.619816.0644
NODDeveloping tillers at six leaf stage, 3rd internode2.509673.260085.8095611.6155
CAR5Developing grain, bracts removed (5 DPA)12.8616.339414.045918.3853
CAR15Developing grain, bracts removed (15 DPA)0.9288651.261241.16453.44579



CDS Structure of MLOC_63864






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63864.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370815NoneNoneNoneNone
MLOC_63864.1CUST_4874_PI427708080AvailableAvailablecontig_48046 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g62600.1 -1 1e-115 341 173/211 (82%) 13103.m06918 protein ras-related protein, putative, expressed
TAIR PP10 AT1G09630.1 -1 3e-104 311 155/209 (74%) | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A, RAB11c | RAB GTPase 11C | chr1:3118350-3119571 REVERSE LENGTH=217