MLOC_63857 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7450490.6910970.5954840.734275
LEAShoots from the seedlings (10 cm shoot stage)0.4659740.3150640.3940910.343319
INF1Young developing inflorescences (5mm)1.925572.190812.154812.00279
INF2Developing inflorescences (1-1.5 cm)2.993334.321643.68184.50213
ROORoots from the seedlings (10 cm shoot stage)0.3697990.2347010.4663180.35324
NODDeveloping tillers at six leaf stage, 3rd internode0.08359030.09010370.08109610.273065
CAR5Developing grain, bracts removed (5 DPA)0.6700550.4014650.7480460.644904
CAR15Developing grain, bracts removed (15 DPA)0.05389670.1044270.1039740.236115



CDS Structure of MLOC_63857






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63857.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356414NoneNoneNoneNone
MLOC_63857.4CUST_4873_PI427708080AvailableAvailablecontig_48038 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g20420.1 +3 0.0 695 350/395 (89%) 13108.m02129 protein MGD2, putative, expressed
TAIR PP10 AT5G20410.1 +3 0.0 567 286/403 (71%) | Symbols: MGD2, ATMGD2 | monogalactosyldiacylglycerol synthase 2 | chr5:6896765-6898581 FORWARD LENGTH=468