MLOC_63844 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.727949.179728.877247.87301
LEAShoots from the seedlings (10 cm shoot stage)4.613623.296143.048832.98998
INF1Young developing inflorescences (5mm)27.559326.659624.543120.3552
INF2Developing inflorescences (1-1.5 cm)22.226920.563319.993421.1087
ROORoots from the seedlings (10 cm shoot stage)3.735386.575946.043586.55166
NODDeveloping tillers at six leaf stage, 3rd internode1.69141.735173.607166.34417
CAR5Developing grain, bracts removed (5 DPA)11.219512.074913.030410.5442
CAR15Developing grain, bracts removed (15 DPA)4.535484.466734.135969.09763



CDS Structure of MLOC_63844






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63844.6
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371274NoneNoneNoneNone
MLOC_63844.6CUST_4870_PI427708080AvailableAvailablecontig_48021 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g26280.1 +1 0.0 1050 554/730 (76%) 13110.m02236 protein ORC3 - Putative origin recognition complex subunit 3, expressed
TAIR PP10 AT5G16690.1 +1 0.0 548 320/733 (44%) | Symbols: ORC3, ATORC3 | origin recognition complex subunit 3 | chr5:5474410-5479878 FORWARD LENGTH=734