MLOC_6384 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 14.8297 | 11.2812 | 12.8199 | 14.0457 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 14.5843 | 12.7596 | 10.6478 | 12.2285 |
| INF1 | Young developing inflorescences (5mm) | 15.233 | 16.4762 | 14.5878 | 15.1214 |
| INF2 | Developing inflorescences (1-1.5 cm) | 15.6561 | 14.5157 | 12.1848 | 18.5717 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 13.4879 | 12.9767 | 13.6692 | 19.4048 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 9.23539 | 13.6786 | 14.9262 | 59.6945 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.48583 | 8.8687 | 9.9835 | 11.4012 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.44608 | 5.75213 | 5.84161 | 15.0064 |
CDS Structure of MLOC_6384
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6384.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g09310.1 |
-1 |
9e-61 |
204 |
117/145 (81%) |
13111.m00982 protein zinc finger CCHC domain-containing protein 10, putative, expressed |
| TAIR PP10 |
AT5G49400.1 |
-1 |
3e-47 |
167 |
97/127 (76%) |
zinc knuckle (CCHC-type) family protein | chr5:20031154-20031981 FORWARD LENGTH=275 |
