- Predicted Gene MLOC_63808
MLOC_63808 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_63808_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_63808_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 8.21652 | 6.98114 | 6.8103 | 7.2697 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 46.076 | 66.8379 | 63.974 | 48.6405 |
INF1 | Young developing inflorescences (5mm) | 6.38717 | 6.27759 | 6.60787 | 5.64786 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.06065 | 3.98678 | 3.96199 | 4.54902 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.796139 | 1.20472 | 2.92435 | 1.71793 |
NOD | Developing tillers at six leaf stage, 3rd internode | 29.5088 | 23.7923 | 28.0933 | 79.4667 |
CAR5 | Developing grain, bracts removed (5 DPA) | 14.445 | 16.789 | 17.7307 | 17.011 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.43613 | 4.4242 | 4.5277 | 11.7293 |
CDS Structure of MLOC_63808
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_63808.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g01302.1 |
+3 |
1e-133 |
389 |
200/239 (84%) |
13101.m00042 protein shikimate kinase, putative, expressed |
TAIR PP10 |
AT3G26900.3 |
+3 |
2e-46 |
163 |
92/251 (37%) |
| Symbols: SKL1, ATSKL1 | shikimate kinase like 1 | chr3:9912314-9914424 REVERSE LENGTH=280 |