MLOC_63787 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains46.537156.365851.999568.9574
LEAShoots from the seedlings (10 cm shoot stage)55.622728.240332.001738.1474
INF1Young developing inflorescences (5mm)30.348739.926736.256137.7822
INF2Developing inflorescences (1-1.5 cm)50.621851.432560.992670.8577
ROORoots from the seedlings (10 cm shoot stage)39.152945.775245.755374.9556
NODDeveloping tillers at six leaf stage, 3rd internode189.87204.687216.886810.209
CAR5Developing grain, bracts removed (5 DPA)61.510564.809356.807575.1093
CAR15Developing grain, bracts removed (15 DPA)54.317151.45349.9872148.553



CDS Structure of MLOC_63787






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63787.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_63787.3CUST_14600_PI427708080AvailableAvailablecontig_47971 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g64970.1 +1 0.0 612 329/361 (91%) 13101.m07011 protein CAMK_CAMK_like.11 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
TAIR PP10 AT5G63650.1 +1 2e-172 495 241/314 (77%) | Symbols: SNRK2-5, SNRK2.5, SRK2H | SNF1-related protein kinase 2.5 | chr5:25481631-25483495 REVERSE LENGTH=360