- Predicted Gene MLOC_63773
MLOC_63773 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 58.5237 | 65.975 | 67.7846 | 68.728 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 41.6058 | 25.6755 | 25.6411 | 28.6152 |
INF1 | Young developing inflorescences (5mm) | 155.769 | 150.405 | 145.096 | 133.779 |
INF2 | Developing inflorescences (1-1.5 cm) | 108.675 | 127.097 | 120.445 | 136.468 |
ROO | Roots from the seedlings (10 cm shoot stage) | 50.1723 | 70.04 | 62.001 | 87.8537 |
NOD | Developing tillers at six leaf stage, 3rd internode | 10.362 | 10.7893 | 22.3041 | 47.3683 |
CAR5 | Developing grain, bracts removed (5 DPA) | 87.1096 | 86.4235 | 87.2198 | 89.0283 |
CAR15 | Developing grain, bracts removed (15 DPA) | 19.933 | 18.2426 | 16.6619 | 43.8894 |
CDS Structure of MLOC_63773
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_63773.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g42220.1 |
+2 |
0.0 |
968 |
495/525 (94%) |
13103.m04543 protein T-complex protein, putative, expressed |
TAIR PP10 |
AT5G20890.1 |
+2 |
0.0 |
908 |
458/525 (87%) |
TCP-1/cpn60 chaperonin family protein | chr5:7087020-7089906 REVERSE LENGTH=527 |