MLOC_63773 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains58.523765.97567.784668.728
LEAShoots from the seedlings (10 cm shoot stage)41.605825.675525.641128.6152
INF1Young developing inflorescences (5mm)155.769150.405145.096133.779
INF2Developing inflorescences (1-1.5 cm)108.675127.097120.445136.468
ROORoots from the seedlings (10 cm shoot stage)50.172370.0462.00187.8537
NODDeveloping tillers at six leaf stage, 3rd internode10.36210.789322.304147.3683
CAR5Developing grain, bracts removed (5 DPA)87.109686.423587.219889.0283
CAR15Developing grain, bracts removed (15 DPA)19.93318.242616.661943.8894



CDS Structure of MLOC_63773






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63773.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249814.1NoneNoneNoneNone
MLOC_63773.1CUST_4853_PI427708080AvailableAvailablecontig_47956 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g42220.1 +2 0.0 968 495/525 (94%) 13103.m04543 protein T-complex protein, putative, expressed
TAIR PP10 AT5G20890.1 +2 0.0 908 458/525 (87%) TCP-1/cpn60 chaperonin family protein | chr5:7087020-7089906 REVERSE LENGTH=527