MLOC_63771 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains50.158343.649946.615748.4387
LEAShoots from the seedlings (10 cm shoot stage)56.717535.226636.564335.5386
INF1Young developing inflorescences (5mm)30.46920.633618.760521.6527
INF2Developing inflorescences (1-1.5 cm)5.51556.327457.008417.69511
ROORoots from the seedlings (10 cm shoot stage)38.408535.906837.305442.9208
NODDeveloping tillers at six leaf stage, 3rd internode29.879727.648819.154470.8632
CAR5Developing grain, bracts removed (5 DPA)2.331892.729782.043212.64595
CAR15Developing grain, bracts removed (15 DPA)4.398684.497163.2557711.2372



CDS Structure of MLOC_63771






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63771.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359671NoneNoneNoneNone
MLOC_63771.1CUST_375_PI427708083AvailableAvailablecontig_47955 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g23560.1 +3 0.0 542 275/353 (78%) 13109.m02227 protein dehydrogenase, putative, expressed
TAIR PP10 AT4G37980.1 +3 5e-151 440 223/344 (65%) | Symbols: ELI3-1, ELI3, ATCAD7, CAD7 | elicitor-activated gene 3-1 | chr4:17852670-17854302 FORWARD LENGTH=357