- Predicted Gene MLOC_63770
MLOC_63770 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 4.60881 | 7.32634 | 6.18906 | 7.082 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.11918 | 8.21688 | 6.59256 | 7.56404 |
INF1 | Young developing inflorescences (5mm) | 8.58025 | 7.55052 | 8.02639 | 7.38144 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.04695 | 6.99792 | 6.59734 | 8.13032 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.35951 | 3.58716 | 5.01798 | 4.8244 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.22535 | 1.98861 | 2.67305 | 8.37756 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.38674 | 5.60146 | 4.52102 | 5.49008 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.13124 | 0.906893 | 0.949326 | 2.50041 |
CDS Structure of MLOC_63770
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_63770.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g14230.1 |
+3 |
8e-171 |
490 |
251/282 (89%) |
13111.m01458 protein uncharacterized protein yqxC, putative, expressed |
TAIR PP10 |
AT3G25470.1 |
+3 |
3e-114 |
345 |
174/259 (67%) |
bacterial hemolysin-related | chr3:9233039-9235022 FORWARD LENGTH=301 |