MLOC_63770 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.608817.326346.189067.082
LEAShoots from the seedlings (10 cm shoot stage)9.119188.216886.592567.56404
INF1Young developing inflorescences (5mm)8.580257.550528.026397.38144
INF2Developing inflorescences (1-1.5 cm)7.046956.997926.597348.13032
ROORoots from the seedlings (10 cm shoot stage)1.359513.587165.017984.8244
NODDeveloping tillers at six leaf stage, 3rd internode2.225351.988612.673058.37756
CAR5Developing grain, bracts removed (5 DPA)5.386745.601464.521025.49008
CAR15Developing grain, bracts removed (15 DPA)1.131240.9068930.9493262.50041



CDS Structure of MLOC_63770






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63770.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356923NoneNoneNoneNone
MLOC_63770.1CUST_4852_PI427708080AvailableAvailablecontig_47954 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g14230.1 +3 8e-171 490 251/282 (89%) 13111.m01458 protein uncharacterized protein yqxC, putative, expressed
TAIR PP10 AT3G25470.1 +3 3e-114 345 174/259 (67%) bacterial hemolysin-related | chr3:9233039-9235022 FORWARD LENGTH=301