MLOC_63742 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.683884.883563.891034.64826
LEAShoots from the seedlings (10 cm shoot stage)7.998095.898817.026136.15069
INF1Young developing inflorescences (5mm)3.477344.039584.091553.42574
INF2Developing inflorescences (1-1.5 cm)3.265133.342113.205323.70981
ROORoots from the seedlings (10 cm shoot stage)0.554720.9996771.103561.19765
NODDeveloping tillers at six leaf stage, 3rd internode3.641666.674145.9943820.6165
CAR5Developing grain, bracts removed (5 DPA)3.77453.438713.845143.64926
CAR15Developing grain, bracts removed (15 DPA)0.2384030.3236750.3502640.734224



CDS Structure of MLOC_63742






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63742.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356486NoneNoneNoneNone
MLOC_63742.3CUST_4846_PI427708080AvailableAvailablecontig_47914 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g52640.2 +1 1e-145 426 258/308 (84%) 13103.m05735 protein expressed protein
TAIR PP10 AT3G28460.1 +1 2e-92 288 136/203 (67%) methyltransferases | chr3:10672673-10674297 REVERSE LENGTH=314