MLOC_63741 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains43.298857.377261.671657.9997
LEAShoots from the seedlings (10 cm shoot stage)190.10559.095969.752690.8901
INF1Young developing inflorescences (5mm)12.241412.05410.814510.4879
INF2Developing inflorescences (1-1.5 cm)9.524939.145788.6585610.4233
ROORoots from the seedlings (10 cm shoot stage)72.7954100.15664.3608112.799
NODDeveloping tillers at six leaf stage, 3rd internode680.505671.784521.6651926.57
CAR5Developing grain, bracts removed (5 DPA)114.59116.409119.646118.8
CAR15Developing grain, bracts removed (15 DPA)23.788224.754924.432160.2627



CDS Structure of MLOC_63741






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63741.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365677NoneNoneNoneNone
MLOC_63741.3CUST_4845_PI427708080AvailableAvailablecontig_47914 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g52630.1 -1 0.0 1028 544/606 (90%) 13103.m05732 protein endoglucanase, putative, expressed
TAIR PP10 AT5G49720.1 -1 0.0 835 438/610 (72%) | Symbols: ATGH9A1, TSD1, DEC, KOR, RSW2, IRX2, KOR1, GH9A1 | glycosyl hydrolase 9A1 | chr5:20197765-20200168 REVERSE LENGTH=621