MLOC_63724 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains22.052217.538819.633318.074
LEAShoots from the seedlings (10 cm shoot stage)25.95822.879644.468923.7557
INF1Young developing inflorescences (5mm)15.065625.079769.397130.8419
INF2Developing inflorescences (1-1.5 cm)3.448686.288669.580946.69158
ROORoots from the seedlings (10 cm shoot stage)4.0623111.96278.0207210.7546
NODDeveloping tillers at six leaf stage, 3rd internode72.6098298.7989.17932601.019
CAR5Developing grain, bracts removed (5 DPA)27.350730.876624.466327.2783
CAR15Developing grain, bracts removed (15 DPA)11.963911.349910.504828.4275



CDS Structure of MLOC_63724






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63724.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372406NoneNoneNoneNone
MLOC_63724.2CUST_4836_PI427708080AvailableAvailablecontig_47895 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g39990.1 -3 2e-150 436 221/251 (88%) 13105.m04218 protein expansin precursor, putative, expressed
TAIR PP10 AT1G69530.2 -3 4e-117 350 173/235 (74%) | Symbols: ATEXPA1, EXP1, AT-EXP1, ATEXP1, ATHEXP ALPHA 1.2, EXPA1 | expansin A1 | chr1:26142034-26143051 FORWARD LENGTH=250