MLOC_63717 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.9502361.499081.243821.28345
LEAShoots from the seedlings (10 cm shoot stage)6.27126.435115.022484.56866
INF1Young developing inflorescences (5mm)2.02381.973171.483081.61542
INF2Developing inflorescences (1-1.5 cm)0.5748490.7231151.098760.868736
ROORoots from the seedlings (10 cm shoot stage)0.9738271.433391.557871.44859
NODDeveloping tillers at six leaf stage, 3rd internode2.336651.547351.90913.8483
CAR5Developing grain, bracts removed (5 DPA)1.446831.628591.773421.59656
CAR15Developing grain, bracts removed (15 DPA)0.4325570.1860630.4696230.876127



CDS Structure of MLOC_63717






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63717.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375522NoneNoneNoneNone
MLOC_63717.2CUST_4833_PI427708080AvailableAvailablecontig_47889 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g32200.1 -3 1e-46 157 100/181 (55%) 13102.m03480 protein thioesterase family protein, putative, expressed
TAIR PP10 AT2G29590.1 -3 2e-29 110 60/123 (49%) Thioesterase superfamily protein | chr2:12654602-12655432 REVERSE LENGTH=158