MLOC_63684 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.2669418.352715.597212.862
LEAShoots from the seedlings (10 cm shoot stage)24.736435.732633.730424.6664
INF1Young developing inflorescences (5mm)7.532397.838597.515975.61726
INF2Developing inflorescences (1-1.5 cm)6.935476.219068.350396.74131
ROORoots from the seedlings (10 cm shoot stage)14.259924.069421.484323.8168
NODDeveloping tillers at six leaf stage, 3rd internode6.712767.4138411.870825.1948
CAR5Developing grain, bracts removed (5 DPA)18.961413.969715.323313.7145
CAR15Developing grain, bracts removed (15 DPA)7.477367.158388.0714614.4988



CDS Structure of MLOC_63684






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63684.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356925NoneNoneNoneNone
MLOC_63684.1CUST_4828_PI427708080AvailableAvailablecontig_47855 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g73530.2 -2 0.0 2264 1177/1324 (89%) 13101.m15123 protein ABC transporter, ATP-binding protein, putative, expressed
TAIR PP10 AT4G39850.1 -2 0.0 1827 958/1336 (72%) | Symbols: PXA1, PED3, CTS, ACN2, AtABCD1 | peroxisomal ABC transporter 1 | chr4:18489220-18496762 FORWARD LENGTH=1337