MLOC_6366 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.46581 | 6.15902 | 6.62012 | 5.51823 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.0272 | 9.43476 | 8.20978 | 8.40347 |
| INF1 | Young developing inflorescences (5mm) | 16.9293 | 17.5075 | 17.0024 | 14.1567 |
| INF2 | Developing inflorescences (1-1.5 cm) | 22.3847 | 21.5192 | 21.0758 | 23.9342 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.67124 | 7.00827 | 6.00888 | 8.55987 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.17956 | 6.45506 | 7.23353 | 25.8711 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.85389 | 10.0617 | 10.3657 | 9.98314 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.88639 | 3.78592 | 3.63118 | 8.38966 |
CDS Structure of MLOC_6366
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6366.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g42040.1 |
+1 |
0.0 |
999 |
558/752 (74%) |
13102.m04647 protein MIF4G domain containing protein, putative, expressed |
| TAIR PP10 |
AT2G39260.1 |
+1 |
0.0 |
848 |
457/725 (63%) |
binding;RNA binding | chr2:16392288-16399588 REVERSE LENGTH=1181 |
