MLOC_63657 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.238062.285672.670682.33616
LEAShoots from the seedlings (10 cm shoot stage)10.092818.383923.000913.2585
INF1Young developing inflorescences (5mm)1.772271.654911.423531.42805
INF2Developing inflorescences (1-1.5 cm)2.843751.278492.304922.33859
ROORoots from the seedlings (10 cm shoot stage)1.252930.8054111.83981.04705
NODDeveloping tillers at six leaf stage, 3rd internode7.3042310.301310.988325.7062
CAR5Developing grain, bracts removed (5 DPA)5.35365.196225.040215.20561
CAR15Developing grain, bracts removed (15 DPA)3.298883.490982.484978.19344



CDS Structure of MLOC_63657






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63657.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358629NoneNoneNoneNone
MLOC_63657.1CUST_4821_PI427708080AvailableAvailablecontig_47817 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g05400.1 -1 0.0 820 398/497 (80%) 13111.m00519 protein Ser/Thr protein phosphatase family protein, putative, expressed
TAIR PP10 AT3G52820.1 -1 0.0 551 259/427 (61%) | Symbols: ATPAP22, PAP22 | purple acid phosphatase 22 | chr3:19574236-19576938 REVERSE LENGTH=434