- Predicted Gene MLOC_63657
MLOC_63657 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.23806 | 2.28567 | 2.67068 | 2.33616 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 10.0928 | 18.3839 | 23.0009 | 13.2585 |
INF1 | Young developing inflorescences (5mm) | 1.77227 | 1.65491 | 1.42353 | 1.42805 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.84375 | 1.27849 | 2.30492 | 2.33859 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.25293 | 0.805411 | 1.8398 | 1.04705 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.30423 | 10.3013 | 10.9883 | 25.7062 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.3536 | 5.19622 | 5.04021 | 5.20561 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.29888 | 3.49098 | 2.48497 | 8.19344 |
CDS Structure of MLOC_63657
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_63657.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g05400.1 |
-1 |
0.0 |
820 |
398/497 (80%) |
13111.m00519 protein Ser/Thr protein phosphatase family protein, putative, expressed |
TAIR PP10 |
AT3G52820.1 |
-1 |
0.0 |
551 |
259/427 (61%) |
| Symbols: ATPAP22, PAP22 | purple acid phosphatase 22 | chr3:19574236-19576938 REVERSE LENGTH=434 |