MLOC_6365 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1593331.769611.289451.37426
LEAShoots from the seedlings (10 cm shoot stage)2.120385.299852.462032.7542
INF1Young developing inflorescences (5mm)4.709173.16172.703343.25365
INF2Developing inflorescences (1-1.5 cm)3.223873.53163.820444.27471
ROORoots from the seedlings (10 cm shoot stage)0.8958415.258531.883045.26121
NODDeveloping tillers at six leaf stage, 3rd internode1.869620.7852251.929522.8614
CAR5Developing grain, bracts removed (5 DPA)3.327784.072323.194863.90064
CAR15Developing grain, bracts removed (15 DPA)0.3077070.3496220.7515161.20448



CDS Structure of MLOC_6365






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_6365.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_6365.1CUST_8616_PI427708083AvailableAvailablecontig_137433 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g39129.1 -3 2e-16 77 40/58 (69%) 13103.m04246 protein frigida, putative, expressed
TAIR PP10None-----