MLOC_63625 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.034413.045316.433215.3718
LEAShoots from the seedlings (10 cm shoot stage)4.7862134.602311.77615.2082
INF1Young developing inflorescences (5mm)1.010031.801560.7003281.17922
INF2Developing inflorescences (1-1.5 cm)0.4093570.387370.5282060.527812
ROORoots from the seedlings (10 cm shoot stage)11.79196.286133.505097.74595
NODDeveloping tillers at six leaf stage, 3rd internode0.324770.034151700.0863008
CAR5Developing grain, bracts removed (5 DPA)1.859772.063591.978672.15375
CAR15Developing grain, bracts removed (15 DPA)65.215665.73362.7781175.974



CDS Structure of MLOC_63625






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63625.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374979NoneNoneNoneNone
MLOC_63625.1CUST_4816_PI427708080AvailableAvailablecontig_47776 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g41880.1 +1 0.0 778 353/387 (91%) 13108.m04500 protein nucleotide pyrophosphatase/phosphodiesterase, putative, expressed
TAIR PP10 AT5G50400.1 +1 0.0 634 279/387 (72%) | Symbols: ATPAP27, PAP27 | purple acid phosphatase 27 | chr5:20523575-20526231 REVERSE LENGTH=611