- Predicted Gene MLOC_63625
MLOC_63625 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 15.0344 | 13.0453 | 16.4332 | 15.3718 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.78621 | 34.6023 | 11.776 | 15.2082 |
INF1 | Young developing inflorescences (5mm) | 1.01003 | 1.80156 | 0.700328 | 1.17922 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.409357 | 0.38737 | 0.528206 | 0.527812 |
ROO | Roots from the seedlings (10 cm shoot stage) | 11.7919 | 6.28613 | 3.50509 | 7.74595 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.32477 | 0.0341517 | 0 | 0.0863008 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.85977 | 2.06359 | 1.97867 | 2.15375 |
CAR15 | Developing grain, bracts removed (15 DPA) | 65.2156 | 65.733 | 62.7781 | 175.974 |
CDS Structure of MLOC_63625
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_63625.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g41880.1 |
+1 |
0.0 |
778 |
353/387 (91%) |
13108.m04500 protein nucleotide pyrophosphatase/phosphodiesterase, putative, expressed |
TAIR PP10 |
AT5G50400.1 |
+1 |
0.0 |
634 |
279/387 (72%) |
| Symbols: ATPAP27, PAP27 | purple acid phosphatase 27 | chr5:20523575-20526231 REVERSE LENGTH=611 |