MLOC_63622 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.128691.001631.567861.12088
LEAShoots from the seedlings (10 cm shoot stage)0.9328370.4668241.53360.838728
INF1Young developing inflorescences (5mm)0.5114471.017960.633080.493073
INF2Developing inflorescences (1-1.5 cm)1.035910.7521671.118820.875707
ROORoots from the seedlings (10 cm shoot stage)0.46638000.314347
NODDeveloping tillers at six leaf stage, 3rd internode1.130481.609231.266484.48158
CAR5Developing grain, bracts removed (5 DPA)1.580210.4715510.5778730.713822
CAR15Developing grain, bracts removed (15 DPA)0.5391490.27580101.21152



CDS Structure of MLOC_63622






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63622.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_63622.1NoneAvailableAvailablecontig_47774 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g12190.1 -3 8e-37 133 63/113 (56%) 13104.m01117 protein hAT dimerisation domain-containing protein, putative
TAIR PP10 AT1G41920.1 -3 1e-21 90 46/112 (41%) General transcription factor 2-related zinc finger protein | chr1:15680978-15684487 REVERSE LENGTH=496