MLOC_63615 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.389764.055893.66343.48714
LEAShoots from the seedlings (10 cm shoot stage)3.477240.801451.705751.56398
INF1Young developing inflorescences (5mm)5.690936.527984.388885.04278
INF2Developing inflorescences (1-1.5 cm)9.8378210.983710.206311.8361
ROORoots from the seedlings (10 cm shoot stage)5.196374.90534.556715.11303
NODDeveloping tillers at six leaf stage, 3rd internode0.8512121.554250.5959183.33154
CAR5Developing grain, bracts removed (5 DPA)3.205882.767693.394463.11413
CAR15Developing grain, bracts removed (15 DPA)0.3416420.1886050.3402430.720506



CDS Structure of MLOC_63615






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63615.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359248NoneNoneNoneNone
MLOC_63615.1CUST_4815_PI427708080AvailableAvailablecontig_47770 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g12620.1 +1 0.0 1336 822/1039 (79%) 13111.m01335 protein receptor protein kinase CLAVATA1 precursor, putative, expressed
TAIR PP10 AT5G65700.2 +1 0.0 847 525/943 (56%) | Symbols: BAM1 | Leucine-rich receptor-like protein kinase family protein | chr5:26281826-26284945 FORWARD LENGTH=1003