MLOC_63609 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2408110.2887360.274330.329236
LEAShoots from the seedlings (10 cm shoot stage)0.6520240.1982540.1670650.315701
INF1Young developing inflorescences (5mm)0.4686380.7399920.5108940.561129
INF2Developing inflorescences (1-1.5 cm)1.07071.196171.187111.30059
ROORoots from the seedlings (10 cm shoot stage)0.05143290.2032280.5195620.271146
NODDeveloping tillers at six leaf stage, 3rd internode00.01029940.008125810.0593611
CAR5Developing grain, bracts removed (5 DPA)2.006881.70381.85551.80628
CAR15Developing grain, bracts removed (15 DPA)1.036080.9957730.9357872.30083



CDS Structure of MLOC_63609






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63609.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376846NoneNoneNoneNone
MLOC_63609.1CUST_4813_PI427708080AvailableAvailablecontig_47759 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g22880.1 +1 0.0 667 330/438 (75%) 13103.m02766 protein nucleolar protein 5A, putative, expressed
TAIR PP10 AT3G12860.1 +1 0.0 597 296/431 (69%) NOP56-like pre RNA processing ribonucleoprotein | chr3:4091678-4093921 FORWARD LENGTH=499