MLOC_63593 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1359.581093.191073.091326.3
LEAShoots from the seedlings (10 cm shoot stage)627.679421.751416.291465.697
INF1Young developing inflorescences (5mm)1707.251718.891807.281700.24
INF2Developing inflorescences (1-1.5 cm)1687.91477.811638.21922.71
ROORoots from the seedlings (10 cm shoot stage)1160.19937.521396.231408.72
NODDeveloping tillers at six leaf stage, 3rd internode68.764933.169101.37174.819
CAR5Developing grain, bracts removed (5 DPA)574.826624.841605.825670.968
CAR15Developing grain, bracts removed (15 DPA)242.427244.827225.239623.709



CDS Structure of MLOC_63593






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63593.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252990.1NoneNoneNoneNone
MLOC_63593.1CUST_4810_PI427708080AvailableAvailablecontig_47747 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g38959.1 +3 8e-122 353 175/183 (96%) 13111.m03833 protein 40S ribosomal protein S9-2, putative, expressed
TAIR PP10 AT5G39850.1 +3 2e-111 325 163/187 (87%) Ribosomal protein S4 | chr5:15950053-15951171 FORWARD LENGTH=197