MLOC_63588 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains59.9737117.126103.82596.0272
LEAShoots from the seedlings (10 cm shoot stage)98.69916.40824.961941.8005
INF1Young developing inflorescences (5mm)138.27579.275285.656883.5572
INF2Developing inflorescences (1-1.5 cm)113.948199.688182.587172.562
ROORoots from the seedlings (10 cm shoot stage)2.2235317.917618.575517.7501
NODDeveloping tillers at six leaf stage, 3rd internode8.664233.023770.9422448.55015
CAR5Developing grain, bracts removed (5 DPA)1.815731.462091.370361.43894
CAR15Developing grain, bracts removed (15 DPA)0.715750.3805720.5753491.26182



CDS Structure of MLOC_63588






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63588.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252753.1NoneNoneNoneNone
MLOC_63588.1CUST_4809_PI427708080AvailableAvailablecontig_47733 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g16650.1 +2 0.0 1013 530/800 (66%) 13112.m01765 protein Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed
TAIR PP10 AT3G23510.1 +2 0.0 925 496/833 (60%) Cyclopropane-fatty-acyl-phospholipid synthase | chr3:8428071-8433159 FORWARD LENGTH=867