- Predicted Gene MLOC_63588
MLOC_63588 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 59.9737 | 117.126 | 103.825 | 96.0272 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 98.699 | 16.408 | 24.9619 | 41.8005 |
INF1 | Young developing inflorescences (5mm) | 138.275 | 79.2752 | 85.6568 | 83.5572 |
INF2 | Developing inflorescences (1-1.5 cm) | 113.948 | 199.688 | 182.587 | 172.562 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.22353 | 17.9176 | 18.5755 | 17.7501 |
NOD | Developing tillers at six leaf stage, 3rd internode | 8.66423 | 3.02377 | 0.942244 | 8.55015 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.81573 | 1.46209 | 1.37036 | 1.43894 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.71575 | 0.380572 | 0.575349 | 1.26182 |
CDS Structure of MLOC_63588
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_63588.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g16650.1 |
+2 |
0.0 |
1013 |
530/800 (66%) |
13112.m01765 protein Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed |
TAIR PP10 |
AT3G23510.1 |
+2 |
0.0 |
925 |
496/833 (60%) |
Cyclopropane-fatty-acyl-phospholipid synthase | chr3:8428071-8433159 FORWARD LENGTH=867 |