MLOC_6358 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.326326.929457.929135.63858
LEAShoots from the seedlings (10 cm shoot stage)17.588220.120413.48511.9145
INF1Young developing inflorescences (5mm)1.681031.798851.357051.21341
INF2Developing inflorescences (1-1.5 cm)1.422391.346271.713771.39302
ROORoots from the seedlings (10 cm shoot stage)17.291615.8720.985715.0194
NODDeveloping tillers at six leaf stage, 3rd internode34.459913.879818.846334.6983
CAR5Developing grain, bracts removed (5 DPA)5.020224.473586.67034.32541
CAR15Developing grain, bracts removed (15 DPA)1.451941.869831.733873.55859



CDS Structure of MLOC_6358






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_6358.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_6358.1NoneAvailableAvailablecontig_137425 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g46169.3 +2 1e-43 161 98/162 (60%) 13101.m04743 protein GDSL-like lipase/acylhydrolase, putative, expressed
TAIR PP10 AT5G45910.1 +2 7e-17 84 56/159 (35%) GDSL-like Lipase/Acylhydrolase superfamily protein | chr5:18620420-18622264 REVERSE LENGTH=372