MLOC_63574 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.426110.58489.550349.59931
LEAShoots from the seedlings (10 cm shoot stage)9.260754.124735.320894.78861
INF1Young developing inflorescences (5mm)6.727475.252564.6564.64757
INF2Developing inflorescences (1-1.5 cm)1.953241.720331.559161.88029
ROORoots from the seedlings (10 cm shoot stage)6.185545.320714.226635.30253
NODDeveloping tillers at six leaf stage, 3rd internode10.50565.152015.3607412.8004
CAR5Developing grain, bracts removed (5 DPA)46.153634.367736.730236.2232
CAR15Developing grain, bracts removed (15 DPA)7.067037.360545.2058415.9473



CDS Structure of MLOC_63574






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_63574.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374657NoneNoneNoneNone
MLOC_63574.2CUST_18279_PI427708080AvailableAvailablecontig_47692 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g57880.3 -2 0.0 715 341/429 (79%) 13103.m13028 protein glucan endo-1,3-beta-glucosidase precursor, putative, expressed
TAIR PP10 AT2G19440.1 -2 0.0 615 293/429 (68%) O-Glycosyl hydrolases family 17 protein | chr2:8418164-8419806 REVERSE LENGTH=478